A novel approach for clustering proteomics data using Bayesian fast Fourier transform. |
15769836 |
Bioinformatics |
A novel approach toward development of a rapid blood test for breast cancer. |
14499014 |
Clin Breast Cancer |
Analytical validation of serum proteomic profiling for diagnosis of prostate cancer: sources of sample bias. |
17981926 |
Clin Chem |
Application of mass spectrometry to the discovery of biomarkers for detection of prostate cancer. |
16552720 |
J Cell Biochem |
Boosted decision tree analysis of surface-enhanced laser desorption/ionization mass spectral serum profiles discriminates prostate cancer from noncancer patients. |
12324514 |
Clin Chem |
Characterization and Evidence of the miR-888 Cluster as a Novel Cancer Network in Prostate. |
29330297 |
Mol Cancer Res |
Clinical proteomics: A need to define the field and to begin to set adequate standards. |
21136664 |
Proteomics Clin Appl |
Comparative proteomic analysis of de-N-glycosylated serum from hepatitis B carriers reveals polypeptides that correlate with disease status. |
14997503 |
Proteomics |
Data reduction using a discrete wavelet transform in discriminant analysis of very high dimensionality data. |
12762451 |
Biometrics |
Deconvolution filters to enhance resolution of dense time-of-flight survey spectra in the time-lag optimization range. |
16636999 |
Rapid Commun Mass Spectrom |
Defining the role of mass spectrometry in cancer diagnostics. |
15466969 |
Cancer Epidemiol Biomarkers Prev |
Development of a novel proteomic approach for the detection of transitional cell carcinoma of the bladder in urine. |
11290567 |
Am J Pathol |
Differential capture of serum proteins for expression profiling and biomarker discovery in pre- and posttreatment head and neck cancer samples. |
18043497 |
Laryngoscope |
Direct N-Glycosylation Profiling of Urine and Prostatic Fluid Glycoproteins and Extracellular Vesicles. |
34646811 |
Front Chem |
Endothelial-to-Mesenchymal Transition in Human Adipose Tissue Vasculature Alters the Particulate Secretome and Induces Endothelial Dysfunction. |
31434495 |
Arterioscler Thromb Vasc Biol |
Enhancement of sensitivity and resolution of surface-enhanced laser desorption/ionization time-of-flight mass spectrometric records for serum peptides using time-series analysis techniques. |
15550476 |
Clin Chem |
Evaluation of serum protein profiling by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry for the detection of prostate cancer: I. Assessment of platform reproducibility. |
15613711 |
Clin Chem |
Expression of genes and proteins specific for prostate cancer. |
15535438 |
J Urol |
Feature extraction in the analysis of proteomic mass spectra. |
16502467 |
Proteomics |
Functional clustering algorithm for high-dimensional proteomics data. |
16046812 |
J Biomed Biotechnol |
Generation of a baculovirus recombinant prostate-specific membrane antigen and its use in the development of a novel protein biochip quantitative immunoassay. |
10833385 |
Protein Expr Purif |
Identification of patients with head and neck cancer using serum protein profiles. |
14732777 |
Arch Otolaryngol Head Neck Surg |
Lectin capture strategies combined with mass spectrometry for the discovery of serum glycoprotein biomarkers. |
16760258 |
Mol Cell Proteomics |
Measurement reproducibility in the early stages of biomarker development. |
15665389 |
Dis Markers |
Mining the low molecular weight proteome of blood. |
21136732 |
Proteomics Clin Appl |
National Academy of Clinical Biochemistry Laboratory Medicine Practice Guidelines for use of tumor markers in clinical practice: quality requirements. |
18606634 |
Clin Chem |
Normal, benign, preneoplastic, and malignant prostate cells have distinct protein expression profiles resolved by surface enhanced laser desorption/ionization mass spectrometry. |
12171882 |
Clin Cancer Res |
Optimization of MALDI-TOF MS detection for enhanced sensitivity of affinity-captured proteins spanning a 100 kDa mass range. |
17918874 |
J Proteome Res |
Optimization of small extracellular vesicle isolation from expressed prostatic secretions in urine for in-depth proteomic analysis. |
35119778 |
J Extracell Vesicles |
Overexpression of alpha-defensin is associated with bladder cancer invasiveness. |
16520271 |
Urol Oncol |
Pharmacoproteomic analysis of prechemotherapy and postchemotherapy plasma samples from patients receiving neoadjuvant or adjuvant chemotherapy for breast carcinoma. |
15112261 |
Cancer |
promor: a comprehensive R package for label-free proteomics data analysis and predictive modeling. |
36922981 |
Bioinform Adv |
Prospective comparison of restriction spectrum imaging and non-invasive biomarkers to predict upgrading on active surveillance prostate biopsy. |
36097168 |
Prostate Cancer Prostatic Dis |
Prostate Cancer Biomarker Development: National Cancer Institute's Early Detection Research Network Prostate Cancer Collaborative Group Review. |
33093161 |
Cancer Epidemiol Biomarkers Prev |
Protein profiling in urine for the diagnosis of bladder cancer. |
15277356 |
Clin Chem |
Proteinchip(R) surface enhanced laser desorption/ionization (SELDI) mass spectrometry: a novel protein biochip technology for detection of prostate cancer biomarkers in complex protein mixtures. |
12497173 |
Prostate Cancer Prostatic Dis |
Proteomic approaches to biomarker discovery in prostate and bladder cancers. |
11721637 |
Proteomics |
Proteomic approaches within the NCI early detection research network for the discovery and identification of cancer biomarkers. |
11708463 |
Ann N Y Acad Sci |
Proteomic discovery of non-invasive biomarkers of localized prostate cancer using mass spectrometry. |
34453155 |
Nat Rev Urol |
Proteomic strategies for biomarker identification: progress and challenges. |
11249741 |
Curr Opin Mol Ther |
Proteomics in early detection of cancer. |
11568117 |
Clin Chem |
Quantitation of serum prostate-specific membrane antigen by a novel protein biochip immunoassay discriminates benign from malignant prostate disease. |
11507047 |
Cancer Res |
Reinspection of a Clinical Proteomics Tumor Analysis Consortium (CPTAC) Dataset with Cloud Computing Reveals Abundant Post-Translational Modifications and Protein Sequence Variants. |
34680183 |
Cancers (Basel) |
Resampling and deconvolution of linear time-of-flight records for enhanced protein profiling. |
16637003 |
Rapid Commun Mass Spectrom |
SELDI protein profiling of dunning R-3327 derived cell lines: identification of molecular markers of prostate cancer progression. |
17705230 |
Prostate |
SELDI-TOF MS profiling of serum for detection of the progression of chronic hepatitis C to hepatocellular carcinoma. |
15726646 |
Hepatology |
SELDI-TOF MS whole serum proteomic profiling with IMAC surface does not reliably detect prostate cancer. |
18024530 |
Clin Chem |
SELDI-TOF serum profiling for prognostic and diagnostic classification of breast cancers. |
15258337 |
Dis Markers |
Selective capture of prostatic basal cells and secretory epithelial cells for proteomic and genomic analysis. |
15283892 |
Urol Oncol |
Serum biomarkers to differentiate benign and malignant mammographic lesions. |
17481542 |
J Am Coll Surg |
Serum levels of an isoform of apolipoprotein A-II as a potential marker for prostate cancer. |
15709174 |
Clin Cancer Res |
Serum protein expression profiling for cancer detection: validation of a SELDI-based approach for prostate cancer. |
15258333 |
Dis Markers |
Serum protein fingerprinting coupled with a pattern-matching algorithm distinguishes prostate cancer from benign prostate hyperplasia and healthy men. |
12097261 |
Cancer Res |
Serum protein profiles to identify head and neck cancer. |
15014013 |
Clin Cancer Res |
Serum, salivary and tissue proteomics for discovery of biomarkers for head and neck cancers. |
15723595 |
Expert Rev Mol Diagn |
Signal detection in high-resolution mass spectrometry data. |
18173224 |
J Proteome Res |
Site-Specific Intact N-Linked Glycopeptide Characterization of Prostate-Specific Membrane Antigen from Metastatic Prostate Cancer Cells. |
36061737 |
ACS Omega |
Surfaced-enhanced laser desorption/ionization time-of-flight (SELDI-TOF) differentiation of serum protein profiles of BRCA-1 and sporadic breast cancer. |
15383419 |
Ann Surg Oncol |
Targeted Mass Spectrometry of a Clinically Relevant PSA Variant from Post-DRE Urines for Quantitation and Genotype Determination. |
32614141 |
Proteomics Clin Appl |
The "omics" haystack: defining sources of sample bias in expression profiling. |
16120944 |
Clin Chem |
The early detection research network surface-enhanced laser desorption and ionization prostate cancer detection study: A study in biomarker validation in genitourinary oncology. |
15283893 |
Urol Oncol |